miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|84038631|gb|DW173950.1|DW173950 CTCCATCGATCACTCACTTCACTCCCGCGCTCCAAATTGAAGCTCCGATCAGGTTGATCCATGGATCCAGAAGCTGCCCG
AACTGCCCGGGAATCCCTGGAGTTAGTTTTTCAGATGTCAAATATTGTTGACACAGGATTAGATCGCCACACACTTTCTG
TATTGATTGCCCTTTGTGACCTCGGTTTAAACCCTGAAGCACTTGCTGCTGTTGTCAAGGAGTTCCGGCGGGACCCACCA
TTAACCACCACCACCACCACAACACCACCATCTCCACCGCTTCCTTGATCACATAATTCTTCTTTTCTTTCAACTTTTTC
TGCTTCATCTTTCCATTTTAAAATGACTTTTACCCCATGAAAATATATGCAATTTGTATGTTATGAAGAGCTTTTCCATT
TTGTTTTGGATATGGTCCTTTAAGAGTATGCACATGTTTAACACACAAGGGTAATTTTGTCATTTTGGCTCTCTCTTTCC
TGTTACNNAA




Most similar to sp|Q9M0N8|MZT1B_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9M0N8|MZT1B_ARATH Mitotic-spindle organizing protein 1B
           OS=Arabidopsis thaliana GN=At4g09550 PE=1 SV=1
          Length = 71

 Score =  101 bits (251), Expect = 3e-21
 Identities = 50/58 (86%), Positives = 55/58 (94%)
 Frame = +1

Query: 61  MDPEAARTARESLELVFQMSNIVDTGLDRHTLSVLIALCDLGLNPEALAAVVKEFRRD 234
           MD EA+RTARESLELVF+MSNI+DTGLDRHTLSVLIALCDLG+NPEALA VVKE RR+
Sbjct: 1   MDEEASRTARESLELVFRMSNILDTGLDRHTLSVLIALCDLGVNPEALATVVKELRRE 58